Table 1 Conserved Domain Database [18] sequence search for the α- and β-subunits of the F-type ATP synthase of E.coli and the B- and A- subunits of the A-type ATP synthase of Methanosarcina mazei
From: COGcollator: a web server for analysis of distant relationships between homologous protein families
Query | Profile in CDD database | ||||
|---|---|---|---|---|---|
Flagellum-specific/type III secretory pathway ATPase | V/A-type ATPase, non-catalytic B-subunit | V/A-type ATPase, catalytic A-subunit | F-type ATP synthase, non-catalytic α-subunit | F-type ATP synthase, catalytic β-subunit | |
cd01136 | cd01135 | cd01134 | cd01132 | cd01133 | |
ATPA_ECOLI | 1.27∙10 −54 | 2.13∙10−38 | 1.34∙10−18 | 0.0 | 5.45∙10−25 |
ATPB_ECOLI | 7.82∙10 −68 | 2.13∙10−32 | 6.69∙10−25 | 2.11∙10−24 | 0.0 |
VATB_METMA | 2.08∙10 −51 | 0.0 | 3.58∙10−13 | 9.74∙10−28 | 8.29∙10−23 |
VATA_METMA | 2.96∙10 −45 | 3.76∙10−27 | 0.0 | 1.34∙10−22 | 4.10∙10−28 |