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Table 2 Polymorphisms found in the genomes and transcripts of A. thaliana accessions Bur0 and Tsu1

From: Altools: a user friendly NGS data analyser

  Bur0 Tsu1
# Homozygous SNPs 125,234 107,257
# Heterozygous SNPs 7895 7203
# Homozygous indels 3271 2514
# Heterozygous indels 2072 1677
  CDS 0.32 0.28
SNP frequency 3utr 0.36 0.29
  5utr 0.36 0.29
  CDS 0.003 0.003
Indel frequency 3utr 0.059 0.045
  5utr 0.063 0.049
# Amino acid mutations 49,369 43,215
# Premature stop codons 573 469
# Lost stop codons 114 101
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