From: Prediction of problematic complexes from PPI networks: sparse, embedded, and small complexes
Feature | Description | SWC | DECOMP | SSS |
---|---|---|---|---|
P P I | PPI reliability | ✓ | ✓ | ✓ |
STRING | Functional association | ✓ | ✓ | |
LIT | Literature co-occurrence | ✓ | ✓ | |
D E G PPI | PPI topological degree | ✓ | ||
D E G STRING | STRING topological degree | ✓ | ||
D E G LIT | LIT topological degree | ✓ | ||
S H A R E D PPI | PPI shared neighbours | ✓ | ✓ | |
S H A R E D STRING | STRING shared neighbours | ✓ | ||
S H A R E D LIT | LIT shared neighbours | ✓ | ||
N B C PPI | PPI neighbourhood connectivity | ✓ | ||
N B C STRING | STRING neighbourhood connectivity | ✓ | ||
N B C LIT | LIT neighbourhood connectivity | ✓ | ||
ISO | Isolatedness | ✓ |