From: The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales
Representative Taxa | Locusa | #CDSb,c | #HP2 | #PRUb,c | Interrupted “universal” primer(s) |
---|---|---|---|---|---|
Pyrobaculum, Caldivirga | 374 | 5 (5,0) | 10 | - | Kb366F |
Pyrobaculum, Thermoproteus, Staphylothermus, Desulfurococcalesd | 548 | 2 (0,2) | 13 | - | -none- |
Caldiarchaeum | 722 | - | - | 2 | -none- |
Pyrobaculum, Thermoproteus, Vulcanisaeta, Thermoprotealesd, Caldivirga, Caldiarchaeum | 781 | 14 (2,4) | - | 28 | Ab779F |
Desulfurococcales | 803 | - | - | 3 | Ab789F, Arc806R |
Pyrobaculum, Caldivirga, Desulfurococcales | 901 | - | 8 | - | Ab909R |
Pyrobaculum, Caldivirga, Aeropyrum, Caldiarchaeum | 908 | 4 (1,3) | - | 6 | Ab909R, Ab906F, 926wF, U926R, Ab927R |
Pyrobaculum, Thermoproteus, Caldivirga, Vulcanisaeta, Caldiarchaeum, Desulfuroccocales | 919 | 6 (2,3) | - | 27 (1,0) | Ab906F, 926wF, U926R, Ab927R, A934R |
Caldiarchaeum | 978 | - | 9 | - | -none- |
Pyrobaculum, Thermoproteus, Desulfurococcales | 1093 | 15 (4,11) | 7 | 9 (2,1) | -none- |
Pyrobaculum, Thermoproteus, Desulfurococcales | 1205 | 2 (0,2) | 17 | - | -none- |
Pyrobaculum, Thermoproteus | 1213 | 18 (4,14) | - | 2 | -none- |
Pyrobaculum, Thermoproteus, Vulcanisaeta | 1391 | 15 (7,2) | - | 5 | UA1406R, N1406R, U1406R |