Table 2 Results of the various prediction methods for filtering TMPs on “filtering benchmark set”
MEMSAT-SVM | Octopus | Philius | Phobius | PRO | Scampi-single | Scampi-multi | TMHMM | CCTOP | |
|---|---|---|---|---|---|---|---|---|---|
TP | 469 | 455 | 460 | 462 | 417 | 469 | 454 | 451 | 467 |
FP | 51 | 40 | 24 | 20 | 28 | 26 | 40 | 21 | 21 |
TN | 1371 | 1382 | 1398 | 1402 | 1394 | 1396 | 1382 | 1401 | 1401 |
FN | 5 | 19 | 14 | 12 | 57 | 5 | 20 | 23 | 7 |
Sensitivity | 0.99 | 0.96 | 0.97 | 0.97 | 0.88 | 0.99 | 0.96 | 0.95 | 0.99 |
Specificity | 0.96 | 0.97 | 0.98 | 0.99 | 0.98 | 0.98 | 0.97 | 0.99 | 0.99 |
MCC | 0.93 | 0.92 | 0.96 | 0.96 | 0.88 | 0.96 | 0.92 | 0.94 | 0.96 |