Table 1 DNA transposon-derived genes with de novo gained introns
From: Extensive intron gain in the ancestor of placental mammals
TE group (progenitor of the novel gene) | Gene name (ID) | Presence of introns | Location of introns | Number of introns |
|---|---|---|---|---|
Tc1/mariner/pogo | JRK | yes | 5' UTR/coding | 2 |
JRKL | yes | coding | 2 | |
TIGD 1-7 | yes | 5' UTR | 1 | |
POGZ | yes | coding | 5-13 | |
POGK | yes | coding | 5 | |
SETMAR | yes | coding | 2 | |
Transib | RAG1 | yes | coding | 1-3 |
hAT | ZBED1 | yes | 5' UTR | 1 |
ZBED4 | yes | 5' UTR | 1-2 | |
ZBED5 | yes | 5' UTR/coding | 2 | |
ZMYM6 | yes | coding | 14 | |
ZNF862 | yes | coding | 7 | |
C5ORF54 (Buster3) | yes | 5' UTR | 1 | |
GTF2IRD2 | yes | 5' UTR/coding | 15 | |
PRKRIR (THAP0) | yes | coding | 4 | |
P-element | THAP 1-11 | yes | 5' UTR/coding | diverse |
PIF/Harbinger | HARBI1 | yes | 5' UTR/coding | 2 |
NAIF1 | yes | coding | 1 | |
piggyBac | PGBD1 | yes | 5' UTR/coding | 1-6 |
PGBD2 | yes | 5' UTR/coding | 2 | |
PGBD3 | yes | 5' UTR/coding | 1-4 | |
PGBD4 | yes | coding | 1 | |
PGBD5 | yes | coding | 8 |