Table 3 Gene loci that were identified as being under positive selection by both test 1 and test 2.
From: Interplay of recombination and selection in the genomes of Chlamydia trachomatis
Locus Tag | Locus | Gene Annotation | Test 1 FDR p-value | Test 2 FDR p-value |
|---|---|---|---|---|
CT868 | - | hypothetical protein | 1.89E-05 | 0.005 (Clade 1) |
CT115 | - | inclusion membrane protein D | 0.00045 | 0.0003 (Clade 1) |
CT249 | - | hypothetical protein | 0.0038 | 0.078 (Clade 1) |
CT456 | - | hypothetical protein/translocated actin-recruiting protein (tarp) | 0.0021 | 6.3E-06 (Clade 1) |
CT011 | - | hypothetical protein | 0.0088 | 0.002 (Clade 2) |
CT823 | htrA | serine protease | 0.00014 | 0.007 (Clade 3) |
CT012 | - | Hypothetical protein/putative integral membrane protein | 2.56E-12 | 2.12E-23 (Clade 3) |
CT147 | - | Hypothetical protein/putative integral membrane protein | 6.31E-14 | 7.34E-15 (Clade 3) |
CT209 | leuS | leucyl-tRNA synthetase | 7.36E-06 | 0.01 (Clade 3) |
CT227 | - | hypothetical protein | 0.0017 | 1.63E-07 (Clade 3) |
CT244 | - | hypothetical protein | 2.95E-06 | 1.56E-08 (Clade 3) |
CT604 | groEL_2 | 60 kDa chaperonin GroEL2 | 0.006 | 1.35E-15 (Clade 4) |
CT745 | hemG | protoporphyrinogen oxidase | 0.021 | 8.32E-07 (Clade 4) |
CT840 | mesJ | tRNA(Ile)-lysidine synthase/PP-loop superfamily ATPase | 0.03 | 0.036 (Clade 4) |
CT841 | ftsH | ATP-dependent zinc protease/Cell division protein | 0.06 | 0.087 (Clade 4) |
CT847 | - | hypothetical protein | 0.031 | 0.018 (Clade 4) |
CT875 | - | hypothetical protein | 2.93E-07 | 0.001 (Clade 4) |
CT223 | - | hypothetical protein | 2.95E-06 | 0.05 (Clade 4) |
CT286 | clpC | ATP-dependent Clp protease | 0.019 | 0.036 (Clade 4) |