PFAM ID | Description | Archaea | Bacteria | Eukaryotes | Viruses |
---|---|---|---|---|---|
PF00136 | DNA polymerase family B | 45 | 195 | 31 | 384 |
PF03104 | DNA polymerase family B, exonuclease domain | 45 | 210 | 31 | 173 |
PF01068 | ATP dependent DNA ligase domain | 45 | 372 | 31 | 50 |
PF01096 | Transcription factor S-II (TFIIS) | 45 | 1 | 31 | 44 |
PF00867 | XPG I-region | 43 | 0 | 31 | 37 |
PF04566 | RNA polymerase Rpb2, domain 4 | 45 | 0 | 32 | 31 |
PF04567 | RNA polymerase Rpb2, domain 5 | 45 | 0 | 32 | 31 |
PF01896 | Eukaryotic and archaeal DNA primase small subunit | 44 | 159 | 31 | 30 |
PF04675 | DNA ligase N terminus | 44 | 167 | 31 | 20 |
PF04679 | ATP dependent DNA ligase C terminal region | 44 | 248 | 31 | 20 |
PF00752 | XPG N-terminal domain | 43 | 0 | 31 | 16 |
PF00705 | Proliferating cell nuclear antigen, N-terminal domain | 45 | 0 | 33 | 10 |
PF01191 | RNA polymerase Rpb5, C-terminal domain | 44 | 0 | 32 | 5 |
PF00352 | Transcription factor TFIID (or TATA-binding protein, TBP) | 45 | 0 | 33 | 4 |
PF01194 | RNA polymerases N/8 kDa subunit | 45 | 0 | 30 | 3 |
PF01981 | Peptidyl-tRNA hydrolase PTH2 | 45 | 26 | 30 | 3 |
PF00382 | Transcription factor TFIIB repeat | 45 | 0 | 32 | 3 |
PF03876 | RNA polymerase Rpb7-like, N-terminal domain | 42 | 0 | 31 | 2 |
PF08542 | Replication factor C | 44 | 0 | 31 | 2 |
PF02933 | Cell division protein 48 (CDC48), domain 2 | 45 | 18 | 31 | 1 |
PF01599 | Ribosomal protein S27a | 41 | 0 | 32 | 1 |
PF02359 | Cell division protein 48 (CDC48), N-terminal domain | 45 | 44 | 32 | 1 |
PF01873 | Domain found in IF2B/IF5 | 45 | 0 | 33 | 1 |
PF01253 | Translation initiation factor SUI1 | 45 | 287 | 33 | 1 |