From: Network dynamics of eukaryotic LTR retroelements beyond phylogenetic trees
Element | Group | Gene ID | Chromosome | Host | Structure |
---|---|---|---|---|---|
Cubel | Bel/Pao | 170058572 | Unknown | C. quinquefasciatus | LTR-GAG-POL-LTR |
Gabel | Bel/Pao | 83921752 | Unknown | G. aculeatus | LTR-GAG-POL-LTR |
Hydra3-1 | Bel/Pao | 204801980 | Unknown | H. magnipapillata | LTR-GAG-POL-LTR |
Kobel | Bel/Pao | 154426342 | Unknown | S. kowalevskii | LTR-GAG-POL-LTR |
Mabel | Bel/Pao | 170588120 | Unknown | B. malayi | GAG-POL |
Nabel | Bel/Pao | 156542142 | Unknown | N. vitripennis | GAG-POL |
Purbel | Bel/Pao | 115954126 | Unknown | S purpuratus | LTR-GAG-POL-LTR |
Spirobel | Bel/Pao | 109716041 | Unknown | T. spiralis | LTR-GAG-POL-LTR |
Tribel | Bel/Pao | 86577607 | III | T. castaneum | LTR-GAG-POL-LTR |
Zebel | Bel/Pao | 38304119 | VII | Zebrafish | LTR-GAG-POL-LTR |
Araco | Ty1/Copia | 12321377 | I | A. thaliana | LTR-GAG-POL-LTR |
Humnum | Ty1/Copia | 194680628 | Unknown | H. numata | LTR-GAG-POL-LTR |
Hydra1-1 | Ty1/Copia | 194993408 | Unknown | H. magnipapillata | LTR-GAG-POL-LTR |
Hydra1-2 | Ty1/Copia | 189515648 | II | Danio rerio | GAG-POL |
Koco | Ty1/Copia | 1255921 | Unknown | D. koepferae | LTR-GAG-POL-LTR |
Oryco1-1 | Ty1/Copia | 41223814 | XII | Oryza sativa | LTR-GAG-POL-LTR |
Oryco1-2 | Ty1/Copia | 32488601 | IV | Oryza sativa | LTR-GAG-POL-LTR |
Batata | Ty1/Copia | 56407676 | Unknown | Ipomoea batatas | LTR-GAG-POL-LTR |
Poco | Ty1/Copia | 157365037 | II | P. trichocarpa | LTR-GAG-POL-LTR |
Tricopia | Ty1/Copia | 86575464 | VIII | T. castaneum | LTR-GAG-POL-LTR |
Vitico1-1 | Ty1/Copia | 123691103 | XV | V. vinifera | LTR-GAG-POL-LTR |
Vitico1-2 | Ty1/Copia | 147783960 | XVI | V. vinifera | LTR-GAG-POL-LTR |
Amn-san | Ty3/Gypsy | 111608668 | Unknown | X. tropicalis | LTR-GAG-POL-LTR |
Amn-ni | Ty3/Gypsy | 187466581 | X | D. rerio | LTR-GAG-POL-LTR |
DRM | Ty3/Gypsy | 46848209 | IV | D. rerio | LTR-GAG-POL-LTR |
Hydra2-1 | Ty3/Gypsy | 204647056 | Unknown | H. magnipapillata | LTR-GAG-POL-LTR |
SPM | Ty3/Gypsy | 115913323 | Unknown | S. purpuratus | LTR-GAG-POL-LTR |
DrFV-1 | Retroviridae | 85857417 | IV | D. rerio | LTR-GAG-POL-AC-LTR |