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Table 5 TAS "islands" in prokaryotic genomes.

From: Comprehensive comparative-genomic analysis of Type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes

ACC no.

Genome

TAS pair

NO. of pairs

distance threshold

No. observed

No. expected

Chi2

NC_005070

Synechococcus sp. WH 8102

all

11

3

6

0.3

82.79

NC_011138

Alteromonas macleodii 'Deep ecotype'

all

19

3

6

0.5

48.27

NC_010842

Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'

all

22

3

7

0.7

47.09

NC_009565

Mycobacterium tuberculosis F11

all

46

2

12

2.1

43.43

NC_004757

Nitrosomonas europaea ATCC 19718

all

48

3

18

4.5

40.8

NC_009525

Mycobacterium tuberculosis H37Ra

all

57

3

16

3.9

36.41

NC_002755

Mycobacterium tuberculosis CDC1551

all

52

3

14

3.2

35.89

NC_008639

Chlorobium phaeobacteroides DSM 266

all

28

2

8

1.2

35.71

NC_008740

Marinobacter aquaeolei VT8

all

15

7

5

0.5

31.72

NC_002945

Mycobacterium bovis AF2122/97

all

53

3

14

3.5

30.44

NC_007484

Nitrosococcus oceani ATCC 19707

all

32

3

9

1.7

28.88

NC_008769

Mycobacterium bovis BCG str. Pasteur 1173P2

all

58

3

15

4.2

27.66

NC_000962

Mycobacterium tuberculosis H37Rv

all

53

4

14

4.1

23.22

NC_010803

Chlorobium limicola DSM 245

all

26

5

10

2.4

23.02

NC_010602

Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'

all

20

8

7

1.4

20.53

NC_010831

Chlorobium phaeobacteroides BS1

all

42

3

12

3.5

20.14

NC_007677

Salinibacter ruber DSM 13855

all

13

8

5

0.8

19.39

NC_008212

Haloquadratum walsbyi DSM 16790

all

10

5

3

0.3

19.31

NC_000917

Archaeoglobus fulgidus DSM 4304

all

30

3

8

1.8

18.79

NC_010161

Bartonella tribocorum CIP 105476

all

22

14

12

3.9

18.33

NC_011060

Pelodictyon phaeoclathratiforme BU-1

all

65

5

23

10.3

17.24

NC_008698

Thermofilum pendens Hrk 5

HEPN-MNT

14

3

4

0.7

10.92

NC_000917

Archaeoglobus fulgidus DSM 4304

AbrB-PIN

12

3

4

1.3

4.18