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Table 1 Network selection results

From: Activating and inhibiting connections in biological network dynamics

Period a c a Std error Change in a P value Iterations to converge Std error
1 0.2 0.1 0.227 1.6 × 10-3 13.61% 1.5 × 10-06 33.5 1.9
   0.2 0.255 2.6 × 10-3 27.41% 6.9 × 10-30 131.0 5.8
   0.5 0.270 6.3 × 10-3 35.21% 3.8 × 10-32 367.2 21.1
   0.8 0.290 7.8 × 10-3 45.06% 4.5 × 10-33 722.4 46.1
  0.5 0.1 0.525 1.4 × 10-3 5.07% 9.0 × 10-06 21.4 0.9
   0.2 0.533 1.8 × 10-3 6.64% 1.7 × 10-14 47.7 1.6
   0.5 0.517 2.9 × 10-3 3.43% 1.5 × 10-06 102.7 4.2
   0.8 0.518 3.3 × 10-3 3.62% 4.8 × 10-07 153.4 7.9
  0.8 0.1 0.823 1.3 × 10-3 2.83% 1.3 × 10-07 15.7 0.5
   0.2 0.828 1.7 × 10-3 3.47% 3.5 × 10-18 27.5 0.7
   0.5 0.818 2.3 × 10-3 2.31% 8.6 × 10-18 32.3 0.7
   0.8 0.813 1.8 × 10-3 1.65% 1.0 × 10-14 28.8 0.7
2 0.2 0.1 0.247 5.3 × 10-3 23.65% 0.064 6.5 1.2
   0.2 0.192 7.6 × 10-3 -3.92% 0.66 7.3 1.5
   0.5 0.207 9.4 × 10-3 3.50% 0.51 7.6 1.0
   0.8 0.199 8.7 × 10-3 -0.30% 0.94 8.0 1.3
  0.5 0.1 0.465 5.2 × 10-3 -7.01% 0.25 14.9 3.1
   0.2 0.505 7.3 × 10-3 1.01% 0.82 8.1 1.2
   0.5 0.497 9.7 × 10-3 -0.50% 0.86 13.5 1.8
   0.8 0.500 6.6 × 10-3 -0.07% 0.97 27.1 4.1
  0.8 0.1 0.752 5.2 × 10-3 -6.05% 0.0063 38.9 5.5
   0.2 0.778 8.5 × 10-3 -2.76% 0.1 33.5 6.4
   0.5 0.753 1.0 × 10-3 -5.93% 1.4 × 10-06 55.8 6.9
   0.8 0.767 8.6 × 10-3 -4.15% 9.7 × 10-07 115.8 13.5
8 0.2 0.1 0.229 4.4 × 10-3 14.74% 0.071 123.8 17.1
   0.2 0.231 5.5 × 10-3 15.59% 0.0013 103.7 7.3
   0.5 0.244 1.1 × 10-3 22.23% 9.3 × 10-09 296.2 25.9
   0.8 0.273 7.3 × 10-3 36.60% 3.2 × 10-23 527.0 47.6
  0.5 0.1 0.459 4.3 × 10-3 -8.15% 0.062 111.8 14.4
   0.2 0.486 6.5 × 10-3 -2.70% 0.42 90.5 7.8
   0.5 0.485 8.5 × 10-3 -3.00% 0.11 174.1 14.1
   0.8 0.498 4.7 × 10-3 -0.50% 0.60 253.7 11.6
  0.8 0.1 0.800 5.9 × 10-3 0.01% 0.99 102.3 10.9
   0.2 0.785 7.1 × 10-3 -1.84% 0.18 141.6 19.0
   0.5 0.747 8.6 × 10-3 -6.66% 5.4 × 10-12 325.3 2.04
   0.8 0.732 6.9 × 10-3 -8.53% 9.2 × 10-15 540.2 34.1
16 0.2 0.1 0.210 4.3 × 10-3 5.11% 0.47 483.9 52.8
   0.2 0.221 5.6 × 10-3 10.38% 0.017 406.1 32.7
   0.5 0.245 9.9 × 10-3 22.72% 4.4 × 10-09 416.9 36.1
   0.8 0.273 6.7 × 10-3 36.72% 1.6 × 10-20 676.9 44.9
  0.5 0.1 0.503 6.5 × 10-3 0.50% 0.89 327.9 29.6
   0.2 0.497 7.3 × 10-3 -0.56% 0.84 386.9 34.4
   0.5 0.501 7.6 × 10-3 0.16% 0.92 333.0 23.5
   0.8 0.502 4.6 × 10-3 0.46% 0.63 379.1 15.0
  0.8 0.1 0.754 4.4 × 10-3 -5.75% 0.0014 514.2 78.4
   0.2 0.793 4.8 × 10-3 -0.93% 0.42 429.9 37.6
   0.5 0.754 8.6 × 10-3 -5.74% 6.4 × 10-08 473.5 36.7
   0.8 0.739 8.2 × 10-3 -7.65% 3.6 × 10-18 625.0 36.3
  1. Column 1: period optimized for. Column 2: activating fraction used to generate the network. Column 3: connection probability. Column 4: average activating fraction in optimized networks. Column 5: standard error of average activating fraction. Column 6: average change in activating fraction. Column 7: P value for the change in activating fraction. Column 8: number of iterations for the GDA to converge. Column 9: standard error of iterations to convergence.