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Figure 1 | Biology Direct

Figure 1

From: The signaling helix: a common functional theme in diverse signaling proteins

Figure 1

"Cross-hit" plots for the S-helix vis-à-vis examples of various parallel and anti-parallel CCs. The axes indicate the negative log of E-values from RPS-BLAST searches as a measure of significance. Typical S-helix and b-ZIP, Myosin tail domain or DHp domains are evident as two separated clusters, with no sequences having significant scores with both profiles. The blue dots in all the three graphs are plots of negative log of e-values from RPS-BLAST of S-helix database with S-Helix profile (x1) and of negative log of e-values from RPS-BLAST of S-helix database with bZIP, Myosin Tail domain or DHp profiles (y1). A) The pink dots are plots of negative log of e-values from RPS-BLAST of bZIP database with S-Helix profile (x2) and of negative log of e-values from RPS-BLAST of bZIP database with bZIP profiles (y2). B) The orange dots are plots of negative log of e-values from RPS-BLAST of Myosin Tail domain database with S-Helix profile (x2) and of negative log of e-values from RPS-BLAST of Myosin Tail domain database with Myosin Tail domain profiles (y2). C) The red dots are plots of negative log of e-values from RPS-BLAST of DHp domain database with S-Helix profile (x2) and of negative log of e-values from RPS-BLAST of DHp domain database with DHp domain profiles (y2).

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