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Table 4 Significant differences of conditional selection pressure between Treated and Untreated dataset

From: Distinguishing HIV-1 drug resistance, accessory, and viral fitness mutations using conditional selection pressure analysis of treated versus untreated patient samples

Codon X Codon Y Treated Untreated p-value
   (K a /K s )Y|Xa NXaYa NXaYs (K a /K s )Y|Xa NXaYa NXaYs  
20 10 5.21 74 7 0.08 1 6 0.000021
82 10 10.78 197 9 0.49 4 4 0.000512
71 10 4.39 285 32 0.42 23 27 <0.000001
24 10 25.12 51 0 0.25 2 4 0.000038
12 19 18.25 35 3 3.85 59 24 0.006913
10 54 7.81 164 9 0.19 4 9 <0.000001
71 54 3.65 162 19 0.14 4 12 <0.000001
10 63 12.42 353 14 2.15 70 16 0.000012
93 63 21.23 431 10 6.72 382 28 0.000995
36 71 24.13 196 4 0.46 14 15 <0.000001
63 73 2.76 112 20 0.10 4 19 <0.000001
71 82 10.73 196 9 0.59 6 5 0.000199
63 90 18.32 359 23 0.34 9 31 <0.000001
  1. Due to the long list of significant shift results, only the 13 shifts that involved a positive conditional selection in Treated datasets are listed in this table.