From: Method of predicting Splice Sites based on signal interactions
Protein | High-affinity binding site | Functional ESE |
---|---|---|
SRp20 | WCWWC | GCUCCUCUUCC |
 | CUCKUCY | CCUCGUCC |
SC35 | AGSAGAGUA | GRYYMCYR |
 | GWUWCCUGCUA | UGCYGYY |
 | GGGUAUGCUG |  |
 | GAGCAGUAGKS |  |
 | GUUCGAGUA |  |
 | UGUUCSAGWU |  |
 | AGGAGAU |  |
9G8 | (GAC)n | Â |
 | ACGAGAGAY |  |
 | WGGACRA |  |
SF2/ASF | RGAAGAAC | CRSMSGW |
 | AGGACRRAGC |  |
SRp40 | UGGGAGCRGUYRGCUCGY | YRCRKM |
SRp55 | Â | YYWCWSG |
TRA2β | (GAA)n |  |
nhRNP Al | UAGGGW | Â |